Verticalize: printing the input stream vertically.
A useful tool: verticalize is a small C++ tool printing the input stream vertically. The source is available on github : https://github.com/lindenb/ccsandbox/blob/master/src/verticalize.cpp.
An Example with 1000genomes.org :
$ curl -s "ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/release/20100804/ALL.2of4intersection.20100804.sites.vcf.gz"|\ gunzip -c | grep -v "##" |\ verticalize | head -n 30 >>> 2 $1 #CHROM 1 $2 POS 10327 $3 ID rs112750067 $4 REF T $5 ALT C $6 QUAL . $7 FILTER PASS $8 INFO DP=65;AF=0.208;CB=BC,NCBI <<< 2 >>> 3 $1 #CHROM 1 $2 POS 10469 $3 ID rs117577454 $4 REF C $5 ALT G $6 QUAL . $7 FILTER PASS $8 INFO DP=2055;AF=0.020;CB=UM,BC,NCBI <<< 3 (...)That's it, Pierre
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