UniProt RDF via HTTP

Eric Jain has descibed some features about the Unitprot database in RDF in the public-semweb-lifesci@w3.org mailing list.

Getting a single database entry:

http://beta.uniprot.org/uniprot/P00750.rdf
http://beta.uniprot.org/taxonomy/9606.rdf
http://beta.uniprot.org/pathways/9.149.94.241.rdf

http://beta.uniprot.org/uniprot/P12345.rdf
http://beta.uniprot.org/uniprot/P12345.xml
http://beta.uniprot.org/uniprot/P12345.fasta


Get all reviewed, human entries (16'267):

http://beta.uniprot.org/uniprot/?query=organism:9606+reviewed:yes&format=rdf

Same as above, but only first 1'000 entries, and gzipped:

http://beta.uniprot.org/uniprot/?query=organism:9606+reviewed:yes&format=rdf&offset=0&limit=1000&compress=yes

For other queries, just play with the Web interface

From a LSID identifier

http://beta.uniprot.org/?query=urn:lsid:uniprot.org:uniprot:P12345

http://beta.uniprot.org

Some links to the free encyclopedia Wikipedia were recently added in the web resource section. Proteins with a link to Wikipedia are mainly of medical or pharmaceutical interest. Wikipedia articles may describe the discovery of the protein and its use in medicine.

Examples:
Erythropoeitin (P01588)
Renin (P00797)
Insulin (P01308)
Ghrelin (Q9UBU3)