YOKOFAKUN
15 October 2012
Modifying the GATK so it supports a XML-based format for VCF.
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I've modified the sources of the GATK in order to support a XML-based format for the variation in addition of the VCF format. Here are...
14 October 2012
Calculating time from submission to publication / Degree of burden in submitting a paper
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After "404 not found": a database of non-functional resources in the NAR database collection , I've uploaded my second dataset...
5 comments:
27 September 2012
Playing with the #Ensembl REST API: filtering a VCF with javascript
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The new Ensembl REST API was announced today: "We are pleased to announce the beta release of our programming language agnostic REST ...
18 September 2012
Describing protein-protein interactions in XML: customizing the xsd-schema with JAXB, my notebook.
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Say, you want to describe a network of protein-protein interaction using a XML format. Your XML schema will contain a set of Articles/Refere...
1 comment:
Notes about bwa 0.6.2 and the multiple hits.
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Here are my notes about the way bwa 0.6.2 handles the multiple hits. I've created a sub-sequence (~6Mb ) of the human chr22 (see the...
13 September 2012
Translating a DNA sequence in Google Spreadsheet using #GoogleAppScript
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Google has released Google App Script . "Google Apps Script is a JavaScript cloud scripting language that lets you extend Google Apps...
1 comment:
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