YOKOFAKUN
18 July 2011
An interactive 'dialog' generating a SAM Flag
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The following shell script uses the dialog utility to generate a numeric Sam flag . $ sh selectsam.sh ┌───────────────────────SAM FLA...
1 comment:
15 July 2011
I can't save you, but I can help you: reverse-complementing a DNA in OpenOffice
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People in my lab are using "Microsoft Word" to edit and annotate their sequences. Just like Neil , I can't save them but I can...
1 comment:
14 July 2011
A text alignment viewer using the samtools API
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I wrote a modified version of samtools tview . The original code uses the curses API to display an interactive sequence viewer. I wanted to ...
1 comment:
09 July 2011
Storing SNPs in a HDF5 file: my notebook
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I discovered the benefits of using twitter in 2008, the day Deepak Singh replied to one of my tweets related to the storage of a large numb...
1 comment:
04 July 2011
The Neo4j REST API. My notebook
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Neo4j is a open-source graph engine implemented in Java. This post is my notebook for the Neo4J-server , a server combining a REST API ...
1 comment:
28 June 2011
The java library for BigBed and BigWig: my notebook
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Jim Robinson and his team, from the Broad Institute/IGV, have recently released a java library parsing the BigBed and the BigWig formats . ...
3 comments:
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