YOKOFAKUN

In this post , I've just copied the solutions I gave on http://biostar.stackexchange.com/ for the following problem: "How do I do ...

Some tables in the UCSC genome mysql database contains a column named Bin . mysql --user=genome --host=genome-mysql.cse.ucsc.edu -A -D hg1...

The first rule of Bioinfo-Club is: If you don't like a Standard File Format, create a new one and, I don't like the VCF format . VC...

Not Exactly Rocket Science: Inspired by the faidx command in Samtools , I've created a simple basic tool indexing some FASTA sequences....

In his latest post Brad Chapman cited Jessica Kissinger who wished the Galaxy community could access the web services listed in the http:...

This page was copied from http://code.google.com/p/code915/wiki/BigJoin . BigJoin is a java tool I wrote for my lab ( primarily for joining...

In this post, I'll insert a Hapmap genotype file into a SQLite database using the C API for SQLIte . Of course, this is just a test an...

I'm currently trying to see if there is be a correlation between the MAPABILITY and the SEQUENCING DEPTH . The MAPABILITY , generated f...

I'm pleased to announce that I've started a new position as a postdoc in Nantes/France at INSERM/U915 , the Thorax Institute for 3...

Here are my notes for setting-up a GIT remote repository on ubuntu. It basically requires to create a new user @gituser on a server. @gitu...