YOKOFAKUN

This week, I was asked the difference between storing some data using a plain text format and a binary format . I wrote the following code ...

I'm currently playing with the BAM/SAM Java API available in the picard package . This API can be used for creating new programs that re...

In the following post, I'll create a C extension for R . This extension will iterate over all the FASTA sequences in a file and will r...

In the following post, I describe how I've used the OOP features of R to create and use the following class hierarchy : Your browser d...

Here are my notes about MAQ,BWA and SAMTOOLS. MAQ Maq is a software that builds mapping assemblies from short reads generated by the next-g...

In the following post, I use a two-and-a-half-dimensional (2.5) technique to fake a three-dimensional (3D) visualization of Joseph Wright o...

In the following post, I will show how I've implemented a custom C function for R . This C function will translate a DNA to a protein. ...

Thanks to Neil , I've discovered that Biomart was not just a web interace, it also contains a powerful API: Citing http://www.biomart.o...

"The Factory method pattern defines a separate method for creating the objects, which subclasses can then override to specify the deri...