YOKOFAKUN
Showing posts with label
vcf
.
Show all posts
Showing posts with label
vcf
.
Show all posts
15 January 2017
Creating a custom GATK Walker (GATK 3.6) : my notebook
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This is my notebook for creating a custom engine in GATK. Description I want to read a VCF file and to get a table of category/count. So...
04 March 2016
Now in picard: two javascript-based tools filtering BAM and VCF files.
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SamJS and VCFFilterJS are two tools I wrote for jvarkit . Both tools use the embedded java javascript engine to filter BAM or VCF file. ...
1 comment:
Reading a VCF file faster with java 8, htsjdk and java.util.stream.Stream
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java 8 streams "support functional-style operations on streams of elements, such as map-reduce transformations on collections". I...
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